STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhE3Aldehyde-alcohol dehydrogenase AdhE. (304 aa)    
Predicted Functional Partners:
adhE2
Aldehyde-alcohol dehydrogenase AdhE.
 0.999
adhE1
Aldehyde-alcohol dehydrogenase AdhE.
 0.998
nifJ
Pyruvate-flavodoxin oxidoreductase NifJ.
  
 0.977
lpdA-3
Dihydrolipoyl dehydrogenase LpdA.
  
 0.967
KDR95472.1
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.961
pyk
Pyruvate kinase Pyk; Belongs to the pyruvate kinase family.
  
 0.948
nasD
Nitrite reductase [NAD(P)H].
  
 
 0.947
etfA
Electron transfer flavoprotein subunit alpha.
    
 0.943
gabT
Putative 4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.942
rnfB
Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.936
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.