STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95881.1Putative peptide transport system permease protein. (314 aa)    
Predicted Functional Partners:
KDR95880.1
Putative peptide transport system permease protein.
 
 0.998
appD
Oligopeptide transport ATP-binding protein AppD; Belongs to the ABC transporter superfamily.
 0.994
oppA
Oligopeptide-binding protein OppA.
 
 0.990
dppC
Dipeptide transport system permease protein DppC.
 
 0.989
oppD
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 0.987
KDR95876.1
Putative peptide-binding periplasmic protein.
 0.982
appF-2
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
 
 0.978
appA
Oligopeptide-binding protein AppA.
 0.969
appF
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
 
 0.959
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.870
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.