STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95885.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
cprA
3-chloro-4-hydroxyphenylacetate reductive dehalogenase CprA.
       0.732
opuCC
Carnitine transport binding protein OpuCC.
  
  
 0.580
KDR96308.1
Transcriptional regulator, MarR family.
  
     0.563
cdr
Coenzyme A disulfide reductase Cdr; Belongs to the sulfur carrier protein TusA family.
  
  
 0.538
marR_3
MarR family transcriptional regulator.
  
     0.497
KDR96738.1
Glyoxalase family protein.
    
 0.460
glkA
Glucokinase GlkA.
   
 
 0.453
tkt
Transketolase Tkt; Belongs to the transketolase family.
   
 
 0.433
flr
Flavoredoxin Flr.
    
 0.423
fba
Fructose-bisphosphate aldolase Fba.
     
 0.408
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.