STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95903.1HK97 family phage protein. (123 aa)    
Predicted Functional Partners:
KDR95901.1
Tail protein.
 
    0.975
KDR95902.1
Hypothetical protein.
  
    0.975
KDR95904.1
Head-tail adaptor protein.
 
    0.920
KDR95899.1
TP901 family phage tail tape measure protein.
 
     0.881
KDR95900.1
Hypothetical protein.
  
    0.871
KDR95909.1
Portal protein.
 
     0.867
KDR95912.1
Phage terminase, small subunit P27 family.
 
     0.861
KDR95911.1
Putative terminase large subunit.
 
     0.852
KDR95908.1
Prohead protease.
 
     0.822
KDR95907.1
Phage major capsid protein.
 
    0.813
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.