STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95908.1Prohead protease. (204 aa)    
Predicted Functional Partners:
KDR95907.1
Phage major capsid protein.
 
  
 0.971
KDR95909.1
Portal protein.
 
   
 0.965
KDR95911.1
Putative terminase large subunit.
 
     0.912
KDR95912.1
Phage terminase, small subunit P27 family.
 
   
 0.908
KDR95904.1
Head-tail adaptor protein.
 
   
 0.897
KDR95913.1
Putative endonuclease.
 
     0.845
KDR95899.1
TP901 family phage tail tape measure protein.
 
   
 0.835
KDR95901.1
Tail protein.
 
     0.824
KDR95903.1
HK97 family phage protein.
 
     0.822
KDR95905.1
Hypothetical protein.
       0.708
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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