STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95968.1ParB-like protein. (294 aa)    
Predicted Functional Partners:
KDR95967.1
Putative ATPase.
 
 
 0.980
KDR94464.1
Putative exopolyphosphatase.
  
 
 0.791
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.661
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
   
 0.478
tdcB
L-threonine dehydratase catabolic TdcB.
  
 
 0.472
KDR95966.1
Hypothetical protein.
       0.442
tdcB-2
L-threonine dehydratase catabolic TdcB.
  
 
 0.440
hom
Homoserine dehydrogenase Hom.
    
 0.439
hom-2
Homoserine dehydrogenase Hom.
    
 0.439
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.436
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.