STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDR95978.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.911
KDR94841.1
Putative metalloprotease.
   
 
 0.871
KDR94553.1
Putative diguanylate cyclase.
  
  0.831
aruS
Sensor histidine kinase AruS.
    
 0.809
mcp4
Methyl-accepting chemotaxis protein 4.
    
  0.799
KDR94920.1
Diguanylate cyclase/phosphodiesterase.
    
 0.799
KDR96736.1
Hypothetical protein.
    
  0.798
KDR95638.1
Diguanylate cyclase/phosphodiesterase.
     
 0.793
cph2-3
Phytochrome-like protein Cph2.
     
 0.793
KDR95510.1
Diguanylate cyclase and metal dependent phosphohydrolase.
   
 0.783
Your Current Organism:
Peptoclostridium litorale
NCBI taxonomy Id: 1121324
Other names: Clostridium litorale (strain W6), Clostridium litorale DSM 5388, P. litorale DSM 5388, Peptoclostridium litorale DSM 5388, bacterium W6
Server load: low (20%) [HD]