STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ46310.1Competence protein ComEC. (458 aa)    
Predicted Functional Partners:
SHJ46280.1
DNA polymerase III, delta subunit.
     
 0.806
SHJ42567.1
DNA processing protein.
 
  
 0.752
SHJ76291.1
Competence protein ComFC.
 
  
 0.723
SHJ86354.1
Amidohydrolase, PncC family; Belongs to the CinA family.
     
 0.613
SHJ46374.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
       0.603
SHJ46507.1
Competence protein ComEA.
  
  
 0.590
SHJ46341.1
Hypothetical protein.
       0.535
SHK10591.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
    0.493
SHJ42598.1
Magnesium chelatase family protein.
 
  
 0.481
SHJ70684.1
N-terminal methylation site-containing protein.
   
  
 0.476
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.