Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ49516.1 | SHJ54845.1 | SAMN02745248_00302 | SAMN02745248_00361 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.568 |
SHJ49516.1 | SHJ54873.1 | SAMN02745248_00302 | SAMN02745248_00362 | Glycosyltransferase involved in cell wall bisynthesis. | Radical SAM superfamily protein. | 0.418 |
SHJ49516.1 | SHK14298.1 | SAMN02745248_00302 | SAMN02745248_01869 | Glycosyltransferase involved in cell wall bisynthesis. | Coenzyme F420-reducing hydrogenase, beta subunit. | 0.420 |
SHJ54845.1 | SHJ49516.1 | SAMN02745248_00361 | SAMN02745248_00302 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.568 |
SHJ54845.1 | SHJ54873.1 | SAMN02745248_00361 | SAMN02745248_00362 | Hypothetical protein. | Radical SAM superfamily protein. | 0.510 |
SHJ54873.1 | SHJ49516.1 | SAMN02745248_00362 | SAMN02745248_00302 | Radical SAM superfamily protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.418 |
SHJ54873.1 | SHJ54845.1 | SAMN02745248_00362 | SAMN02745248_00361 | Radical SAM superfamily protein. | Hypothetical protein. | 0.510 |
SHJ54873.1 | SHJ54913.1 | SAMN02745248_00362 | SAMN02745248_00363 | Radical SAM superfamily protein. | Acetyltransferase (GNAT) domain-containing protein. | 0.470 |
SHJ54873.1 | SHK14298.1 | SAMN02745248_00362 | SAMN02745248_01869 | Radical SAM superfamily protein. | Coenzyme F420-reducing hydrogenase, beta subunit. | 0.437 |
SHJ54913.1 | SHJ54873.1 | SAMN02745248_00363 | SAMN02745248_00362 | Acetyltransferase (GNAT) domain-containing protein. | Radical SAM superfamily protein. | 0.470 |
SHK14298.1 | SHJ49516.1 | SAMN02745248_01869 | SAMN02745248_00302 | Coenzyme F420-reducing hydrogenase, beta subunit. | Glycosyltransferase involved in cell wall bisynthesis. | 0.420 |
SHK14298.1 | SHJ54873.1 | SAMN02745248_01869 | SAMN02745248_00362 | Coenzyme F420-reducing hydrogenase, beta subunit. | Radical SAM superfamily protein. | 0.437 |