Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ56143.1 | SHJ56176.1 | SAMN02745248_00404 | SAMN02745248_00405 | Alcohol dehydrogenase, class IV. | Ethanolamine utilization protein EutS. | 0.506 |
SHJ56143.1 | SHJ56501.1 | SAMN02745248_00404 | SAMN02745248_00414 | Alcohol dehydrogenase, class IV. | Acetaldehyde dehydrogenase. | 0.999 |
SHJ56143.1 | SHJ56613.1 | SAMN02745248_00404 | SAMN02745248_00417 | Alcohol dehydrogenase, class IV. | Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | 0.628 |
SHJ56143.1 | SHJ69118.1 | SAMN02745248_00404 | SAMN02745248_00716 | Alcohol dehydrogenase, class IV. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.977 |
SHJ56143.1 | ackA | SAMN02745248_00404 | SAMN02745248_00092 | Alcohol dehydrogenase, class IV. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.646 |
SHJ56176.1 | SHJ56143.1 | SAMN02745248_00405 | SAMN02745248_00404 | Ethanolamine utilization protein EutS. | Alcohol dehydrogenase, class IV. | 0.506 |
SHJ56176.1 | SHJ56501.1 | SAMN02745248_00405 | SAMN02745248_00414 | Ethanolamine utilization protein EutS. | Acetaldehyde dehydrogenase. | 0.616 |
SHJ56176.1 | SHJ56539.1 | SAMN02745248_00405 | SAMN02745248_00415 | Ethanolamine utilization protein EutS. | Ethanolamine utilization protein EutM. | 0.831 |
SHJ56176.1 | SHJ56572.1 | SAMN02745248_00405 | SAMN02745248_00416 | Ethanolamine utilization protein EutS. | Ethanolamine utilization cobalamin adenosyltransferase. | 0.802 |
SHJ56176.1 | SHJ56613.1 | SAMN02745248_00405 | SAMN02745248_00417 | Ethanolamine utilization protein EutS. | Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | 0.661 |
SHJ56176.1 | SHJ56678.1 | SAMN02745248_00405 | SAMN02745248_00419 | Ethanolamine utilization protein EutS. | Ethanolamine utilization protein EutN. | 0.873 |
SHJ56176.1 | SHJ56711.1 | SAMN02745248_00405 | SAMN02745248_00420 | Ethanolamine utilization protein EutS. | BMC domain-containing protein. | 0.872 |
SHJ56501.1 | SHJ56143.1 | SAMN02745248_00414 | SAMN02745248_00404 | Acetaldehyde dehydrogenase. | Alcohol dehydrogenase, class IV. | 0.999 |
SHJ56501.1 | SHJ56176.1 | SAMN02745248_00414 | SAMN02745248_00405 | Acetaldehyde dehydrogenase. | Ethanolamine utilization protein EutS. | 0.616 |
SHJ56501.1 | SHJ56539.1 | SAMN02745248_00414 | SAMN02745248_00415 | Acetaldehyde dehydrogenase. | Ethanolamine utilization protein EutM. | 0.855 |
SHJ56501.1 | SHJ56572.1 | SAMN02745248_00414 | SAMN02745248_00416 | Acetaldehyde dehydrogenase. | Ethanolamine utilization cobalamin adenosyltransferase. | 0.739 |
SHJ56501.1 | SHJ56613.1 | SAMN02745248_00414 | SAMN02745248_00417 | Acetaldehyde dehydrogenase. | Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | 0.843 |
SHJ56501.1 | SHJ56646.1 | SAMN02745248_00414 | SAMN02745248_00418 | Acetaldehyde dehydrogenase. | Ethanolamine utilization protein. | 0.457 |
SHJ56501.1 | SHJ56678.1 | SAMN02745248_00414 | SAMN02745248_00419 | Acetaldehyde dehydrogenase. | Ethanolamine utilization protein EutN. | 0.646 |
SHJ56501.1 | SHJ56711.1 | SAMN02745248_00414 | SAMN02745248_00420 | Acetaldehyde dehydrogenase. | BMC domain-containing protein. | 0.629 |
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