Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ49516.1 | SHJ71122.1 | SAMN02745248_00302 | SAMN02745248_00776 | Glycosyltransferase involved in cell wall bisynthesis. | O-antigen ligase. | 0.598 |
SHJ49516.1 | SHK08026.1 | SAMN02745248_00302 | SAMN02745248_01723 | Glycosyltransferase involved in cell wall bisynthesis. | Fucose 4-O-acetylase. | 0.423 |
SHJ49516.1 | SHK11139.1 | SAMN02745248_00302 | SAMN02745248_01793 | Glycosyltransferase involved in cell wall bisynthesis. | Protein of unknown function. | 0.640 |
SHJ49516.1 | SHK11196.1 | SAMN02745248_00302 | SAMN02745248_01795 | Glycosyltransferase involved in cell wall bisynthesis. | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | 0.960 |
SHJ49516.1 | SHK23429.1 | SAMN02745248_00302 | SAMN02745248_02114 | Glycosyltransferase involved in cell wall bisynthesis. | NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. | 0.779 |
SHJ71122.1 | SHJ49516.1 | SAMN02745248_00776 | SAMN02745248_00302 | O-antigen ligase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.598 |
SHJ71122.1 | SHK08026.1 | SAMN02745248_00776 | SAMN02745248_01723 | O-antigen ligase. | Fucose 4-O-acetylase. | 0.465 |
SHJ71122.1 | SHK11139.1 | SAMN02745248_00776 | SAMN02745248_01793 | O-antigen ligase. | Protein of unknown function. | 0.449 |
SHJ71122.1 | SHK11196.1 | SAMN02745248_00776 | SAMN02745248_01795 | O-antigen ligase. | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | 0.843 |
SHJ71122.1 | SHK23429.1 | SAMN02745248_00776 | SAMN02745248_02114 | O-antigen ligase. | NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC. | 0.473 |
SHK08026.1 | SHJ49516.1 | SAMN02745248_01723 | SAMN02745248_00302 | Fucose 4-O-acetylase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.423 |
SHK08026.1 | SHJ71122.1 | SAMN02745248_01723 | SAMN02745248_00776 | Fucose 4-O-acetylase. | O-antigen ligase. | 0.465 |
SHK08026.1 | SHK11196.1 | SAMN02745248_01723 | SAMN02745248_01795 | Fucose 4-O-acetylase. | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | 0.843 |
SHK11139.1 | SHJ49516.1 | SAMN02745248_01793 | SAMN02745248_00302 | Protein of unknown function. | Glycosyltransferase involved in cell wall bisynthesis. | 0.640 |
SHK11139.1 | SHJ71122.1 | SAMN02745248_01793 | SAMN02745248_00776 | Protein of unknown function. | O-antigen ligase. | 0.449 |
SHK11139.1 | SHK11196.1 | SAMN02745248_01793 | SAMN02745248_01795 | Protein of unknown function. | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | 0.917 |
SHK11196.1 | SHJ49516.1 | SAMN02745248_01795 | SAMN02745248_00302 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Glycosyltransferase involved in cell wall bisynthesis. | 0.960 |
SHK11196.1 | SHJ71122.1 | SAMN02745248_01795 | SAMN02745248_00776 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | O-antigen ligase. | 0.843 |
SHK11196.1 | SHK08026.1 | SAMN02745248_01795 | SAMN02745248_01723 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Fucose 4-O-acetylase. | 0.843 |
SHK11196.1 | SHK11139.1 | SAMN02745248_01795 | SAMN02745248_01793 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Protein of unknown function. | 0.917 |
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