STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ74121.1DNA-binding transcriptional regulator, XRE-family HTH domain. (140 aa)    
Predicted Functional Partners:
SHJ74154.1
Zn-dependent peptidase ImmA, M78 family.
 
    0.911
SHJ74090.1
Hypothetical protein.
 
     0.874
SHK21020.1
Protein of unknown function.
 
    0.790
SHJ86354.1
Amidohydrolase, PncC family; Belongs to the CinA family.
    
 0.598
SHJ68830.1
Two-component system, chemotaxis family, response regulator CheY.
    
  0.540
SHJ69118.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.491
SHJ76038.1
Protein of unknown function.
  
     0.440
SHJ74978.1
Protein of unknown function.
  
     0.436
SHK06815.1
Putative ABC transport system ATP-binding protein.
  
    0.401
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.