STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ74430.1Hypothetical protein. (1059 aa)    
Predicted Functional Partners:
SHJ74464.1
Hypothetical protein.
       0.800
SHJ74399.1
Hypothetical protein.
       0.773
SHJ74531.1
ATP-dependent helicase HepA.
       0.736
SHJ74564.1
Hypothetical protein.
       0.736
SHJ74595.1
Nuclease-related domain-containing protein.
       0.732
SHJ74498.1
Helicase conserved C-terminal domain-containing protein.
       0.722
SHJ74624.1
DNA-binding transcriptional regulator, XRE family.
       0.705
SHJ57098.1
Cellulose binding domain-containing protein.
  
 
  0.695
SHK36530.1
Cellulose binding domain-containing protein.
  
 
  0.695
SHJ74310.1
DNA sulfur modification protein DndD.
       0.580
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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