STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ75079.1Gamma-glutamyl cyclotransferase, AIG2-like. (175 aa)    
Predicted Functional Partners:
SHJ75110.1
Putative amidoligase enzyme.
 
    0.963
SHJ75042.1
NlpC/P60 family protein.
 
     0.904
SHJ75173.1
AAA-like domain-containing protein.
 
     0.895
SHJ75010.1
Hypothetical protein.
  
    0.793
SHJ75145.1
Hypothetical protein.
       0.778
SHJ74978.1
Protein of unknown function.
       0.751
SHJ76009.1
Hypothetical protein.
 
    0.647
SHJ75867.1
YodL-like.
 
     0.604
SHJ96081.1
Protein of unknown function.
 
    0.603
SHJ74693.1
Type IV secretion system protein VirD4.
  
     0.533
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.