Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ42567.1 | SHJ42598.1 | SAMN02745248_00072 | SAMN02745248_00073 | DNA processing protein. | Magnesium chelatase family protein. | 0.985 |
SHJ42567.1 | SHJ42632.1 | SAMN02745248_00072 | SAMN02745248_00074 | DNA processing protein. | Putative endonuclease; Belongs to the UPF0102 family. | 0.856 |
SHJ42567.1 | SHJ46310.1 | SAMN02745248_00072 | SAMN02745248_00199 | DNA processing protein. | Competence protein ComEC. | 0.752 |
SHJ42567.1 | SHJ47277.1 | SAMN02745248_00072 | SAMN02745248_00228 | DNA processing protein. | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | 0.549 |
SHJ42567.1 | SHJ68351.1 | SAMN02745248_00072 | SAMN02745248_00691 | DNA processing protein. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.508 |
SHJ42567.1 | SHJ76291.1 | SAMN02745248_00072 | SAMN02745248_00870 | DNA processing protein. | Competence protein ComFC. | 0.892 |
SHJ42567.1 | SHK20450.1 | SAMN02745248_00072 | SAMN02745248_02026 | DNA processing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.515 |
SHJ42567.1 | flgK | SAMN02745248_00072 | SAMN02745248_00700 | DNA processing protein. | Flagellar hook-associated protein 1 FlgK. | 0.478 |
SHJ42598.1 | SHJ42567.1 | SAMN02745248_00073 | SAMN02745248_00072 | Magnesium chelatase family protein. | DNA processing protein. | 0.985 |
SHJ42598.1 | SHJ42632.1 | SAMN02745248_00073 | SAMN02745248_00074 | Magnesium chelatase family protein. | Putative endonuclease; Belongs to the UPF0102 family. | 0.909 |
SHJ42598.1 | SHJ46310.1 | SAMN02745248_00073 | SAMN02745248_00199 | Magnesium chelatase family protein. | Competence protein ComEC. | 0.481 |
SHJ42598.1 | SHJ76291.1 | SAMN02745248_00073 | SAMN02745248_00870 | Magnesium chelatase family protein. | Competence protein ComFC. | 0.794 |
SHJ42632.1 | SHJ42567.1 | SAMN02745248_00074 | SAMN02745248_00072 | Putative endonuclease; Belongs to the UPF0102 family. | DNA processing protein. | 0.856 |
SHJ42632.1 | SHJ42598.1 | SAMN02745248_00074 | SAMN02745248_00073 | Putative endonuclease; Belongs to the UPF0102 family. | Magnesium chelatase family protein. | 0.909 |
SHJ42632.1 | SHJ46310.1 | SAMN02745248_00074 | SAMN02745248_00199 | Putative endonuclease; Belongs to the UPF0102 family. | Competence protein ComEC. | 0.421 |
SHJ42632.1 | SHJ76291.1 | SAMN02745248_00074 | SAMN02745248_00870 | Putative endonuclease; Belongs to the UPF0102 family. | Competence protein ComFC. | 0.630 |
SHJ42632.1 | SHK20450.1 | SAMN02745248_00074 | SAMN02745248_02026 | Putative endonuclease; Belongs to the UPF0102 family. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.489 |
SHJ46310.1 | SHJ42567.1 | SAMN02745248_00199 | SAMN02745248_00072 | Competence protein ComEC. | DNA processing protein. | 0.752 |
SHJ46310.1 | SHJ42598.1 | SAMN02745248_00199 | SAMN02745248_00073 | Competence protein ComEC. | Magnesium chelatase family protein. | 0.481 |
SHJ46310.1 | SHJ42632.1 | SAMN02745248_00199 | SAMN02745248_00074 | Competence protein ComEC. | Putative endonuclease; Belongs to the UPF0102 family. | 0.421 |
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