Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ69118.1 | SHJ77109.1 | SAMN02745248_00716 | SAMN02745248_00898 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 8-oxo-dGTP diphosphatase. | 0.840 |
SHJ69118.1 | SHJ77139.1 | SAMN02745248_00716 | SAMN02745248_00899 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 8-oxo-dGTP diphosphatase. | 0.840 |
SHJ69118.1 | SHJ86354.1 | SAMN02745248_00716 | SAMN02745248_01145 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Amidohydrolase, PncC family; Belongs to the CinA family. | 0.441 |
SHJ69118.1 | SHJ95008.1 | SAMN02745248_00716 | SAMN02745248_01394 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.983 |
SHJ69118.1 | SHK10591.1 | SAMN02745248_00716 | SAMN02745248_01775 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.613 |
SHJ69118.1 | guaB | SAMN02745248_00716 | SAMN02745248_00444 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.827 |
SHJ69118.1 | nadE | SAMN02745248_00716 | SAMN02745248_01998 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.935 |
SHJ77076.1 | SHJ77109.1 | SAMN02745248_00897 | SAMN02745248_00898 | Protein of unknown function. | 8-oxo-dGTP diphosphatase. | 0.668 |
SHJ77076.1 | SHJ77139.1 | SAMN02745248_00897 | SAMN02745248_00899 | Protein of unknown function. | 8-oxo-dGTP diphosphatase. | 0.668 |
SHJ77076.1 | SHJ77171.1 | SAMN02745248_00897 | SAMN02745248_00900 | Protein of unknown function. | NADPH-dependent FMN reductase. | 0.571 |
SHJ77109.1 | SHJ69118.1 | SAMN02745248_00898 | SAMN02745248_00716 | 8-oxo-dGTP diphosphatase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.840 |
SHJ77109.1 | SHJ77076.1 | SAMN02745248_00898 | SAMN02745248_00897 | 8-oxo-dGTP diphosphatase. | Protein of unknown function. | 0.668 |
SHJ77109.1 | SHJ77139.1 | SAMN02745248_00898 | SAMN02745248_00899 | 8-oxo-dGTP diphosphatase. | 8-oxo-dGTP diphosphatase. | 0.773 |
SHJ77109.1 | SHJ77171.1 | SAMN02745248_00898 | SAMN02745248_00900 | 8-oxo-dGTP diphosphatase. | NADPH-dependent FMN reductase. | 0.658 |
SHJ77109.1 | SHJ86354.1 | SAMN02745248_00898 | SAMN02745248_01145 | 8-oxo-dGTP diphosphatase. | Amidohydrolase, PncC family; Belongs to the CinA family. | 0.713 |
SHJ77109.1 | SHJ91331.1 | SAMN02745248_00898 | SAMN02745248_01292 | 8-oxo-dGTP diphosphatase. | Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.668 |
SHJ77109.1 | SHJ95008.1 | SAMN02745248_00898 | SAMN02745248_01394 | 8-oxo-dGTP diphosphatase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.717 |
SHJ77109.1 | SHK10591.1 | SAMN02745248_00898 | SAMN02745248_01775 | 8-oxo-dGTP diphosphatase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.436 |
SHJ77109.1 | guaB | SAMN02745248_00898 | SAMN02745248_00444 | 8-oxo-dGTP diphosphatase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.465 |
SHJ77109.1 | nadE | SAMN02745248_00898 | SAMN02745248_01998 | 8-oxo-dGTP diphosphatase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.738 |
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