STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ82024.1Putative peptidoglycan-binding domain-containing protein. (453 aa)    
Predicted Functional Partners:
SHJ82056.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
    0.977
SHK50299.1
Subtilase family protein.
    0.787
SHK50274.1
Subtilase family protein.
    0.785
SHK43582.1
Single-strand binding protein family protein.
  
     0.661
SHJ82085.1
Helix-turn-helix domain-containing protein.
       0.582
SHK22828.1
Small, acid-soluble spore protein, alpha/beta type.
  
     0.522
SHJ82141.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.497
SHK40607.1
LysM repeat-containing protein.
 
   
 0.461
SHJ82114.1
Protein of unknown function.
       0.423
SHJ90540.1
LysM domain-containing protein.
     
 0.419
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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