STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ86052.1ABC-type multidrug transport system, ATPase and permease component. (540 aa)    
Predicted Functional Partners:
SHJ86034.1
ABC-type multidrug transport system, ATPase and permease component.
 
    
0.795
SHJ91789.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.779
SHK06815.1
Putative ABC transport system ATP-binding protein.
  
 
 
0.725
SHK03150.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.715
SHK31465.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.696
SHK07277.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.688
SHK29339.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.635
SHK46437.1
Putative ABC transport system ATP-binding protein.
  
     0.632
SHK29998.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.538
SHJ86013.1
Ornithine cyclodeaminase.
       0.528
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.