Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ73600.1 | SHJ87228.1 | SAMN02745248_00786 | SAMN02745248_01181 | Site-specific DNA recombinase. | Site-specific DNA recombinase. | 0.740 |
SHJ87143.1 | SHJ87228.1 | SAMN02745248_01178 | SAMN02745248_01181 | Putative DNA primase/helicase. | Site-specific DNA recombinase. | 0.409 |
SHJ87196.1 | SHJ87228.1 | SAMN02745248_01180 | SAMN02745248_01181 | Hypothetical protein. | Site-specific DNA recombinase. | 0.475 |
SHJ87228.1 | SHJ73600.1 | SAMN02745248_01181 | SAMN02745248_00786 | Site-specific DNA recombinase. | Site-specific DNA recombinase. | 0.740 |
SHJ87228.1 | SHJ87143.1 | SAMN02745248_01181 | SAMN02745248_01178 | Site-specific DNA recombinase. | Putative DNA primase/helicase. | 0.409 |
SHJ87228.1 | SHJ87196.1 | SAMN02745248_01181 | SAMN02745248_01180 | Site-specific DNA recombinase. | Hypothetical protein. | 0.475 |
SHJ87228.1 | SHJ87249.1 | SAMN02745248_01181 | SAMN02745248_01182 | Site-specific DNA recombinase. | HEPN domain-containing protein. | 0.459 |
SHJ87228.1 | SHJ89507.1 | SAMN02745248_01181 | SAMN02745248_01220 | Site-specific DNA recombinase. | Site-specific DNA recombinase. | 0.743 |
SHJ87228.1 | SHK29517.1 | SAMN02745248_01181 | SAMN02745248_02236 | Site-specific DNA recombinase. | Resolvase, N terminal domain. | 0.486 |
SHJ87249.1 | SHJ87228.1 | SAMN02745248_01182 | SAMN02745248_01181 | HEPN domain-containing protein. | Site-specific DNA recombinase. | 0.459 |
SHJ89507.1 | SHJ87228.1 | SAMN02745248_01220 | SAMN02745248_01181 | Site-specific DNA recombinase. | Site-specific DNA recombinase. | 0.743 |
SHK29517.1 | SHJ87228.1 | SAMN02745248_02236 | SAMN02745248_01181 | Resolvase, N terminal domain. | Site-specific DNA recombinase. | 0.486 |