STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ96552.1Phage minor structural protein, N-terminal region. (839 aa)    
Predicted Functional Partners:
SHJ96527.1
Putative phage tail component, N-terminal domain-containing protein.
   0.992
SHJ96501.1
Phage-related protein.
 
  
 0.959
SHJ96605.1
Glycosyl hydrolases family 18.
 
     0.881
SHJ96470.1
Hypothetical protein.
 
     0.867
SHJ96418.1
Hypothetical protein.
 
     0.864
SHJ96442.1
Phage major tail protein, phi13 family.
 
    0.863
SHJ96392.1
Phage protein, HK97 gp10 family.
 
     0.862
SHJ96359.1
Phage head-tail joining protein.
 
     0.860
SHJ64714.1
Phage tail tape measure protein, TP901 family, core region.
  
 
 0.849
SHJ96664.1
Sporulation related domain-containing protein.
 
     0.830
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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