Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ69118.1 | SHJ95008.1 | SAMN02745248_00716 | SAMN02745248_01394 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.983 |
SHJ69118.1 | SHK00356.1 | SAMN02745248_00716 | SAMN02745248_01541 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.906 |
SHJ69118.1 | SHK00384.1 | SAMN02745248_00716 | SAMN02745248_01542 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 4Fe-4S binding domain-containing protein. | 0.949 |
SHJ69118.1 | SHK10591.1 | SAMN02745248_00716 | SAMN02745248_01775 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.613 |
SHJ69118.1 | SHK49196.1 | SAMN02745248_00716 | SAMN02745248_02661 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.906 |
SHJ69118.1 | rpoB | SAMN02745248_00716 | SAMN02745248_02700 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.686 |
SHJ95008.1 | SHJ69118.1 | SAMN02745248_01394 | SAMN02745248_00716 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.983 |
SHJ95008.1 | SHK00356.1 | SAMN02745248_01394 | SAMN02745248_01541 | Pyruvate kinase; Belongs to the pyruvate kinase family. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.727 |
SHJ95008.1 | SHK10591.1 | SAMN02745248_01394 | SAMN02745248_01775 | Pyruvate kinase; Belongs to the pyruvate kinase family. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.893 |
SHJ95008.1 | SHK20450.1 | SAMN02745248_01394 | SAMN02745248_02026 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.887 |
SHJ95008.1 | SHK49196.1 | SAMN02745248_01394 | SAMN02745248_02661 | Pyruvate kinase; Belongs to the pyruvate kinase family. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.727 |
SHJ95008.1 | rpoA | SAMN02745248_01394 | SAMN02745248_02640 | Pyruvate kinase; Belongs to the pyruvate kinase family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.572 |
SHJ95008.1 | rpoB | SAMN02745248_01394 | SAMN02745248_02700 | Pyruvate kinase; Belongs to the pyruvate kinase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.489 |
SHJ95008.1 | rpoC | SAMN02745248_01394 | SAMN02745248_02701 | Pyruvate kinase; Belongs to the pyruvate kinase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.729 |
SHJ95008.1 | rpoZ | SAMN02745248_01394 | SAMN02745248_00115 | Pyruvate kinase; Belongs to the pyruvate kinase family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.768 |
SHK00356.1 | SHJ69118.1 | SAMN02745248_01541 | SAMN02745248_00716 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.906 |
SHK00356.1 | SHJ95008.1 | SAMN02745248_01541 | SAMN02745248_01394 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.727 |
SHK00356.1 | SHK00384.1 | SAMN02745248_01541 | SAMN02745248_01542 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 4Fe-4S binding domain-containing protein. | 0.844 |
SHK00356.1 | SHK10591.1 | SAMN02745248_01541 | SAMN02745248_01775 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.758 |
SHK00356.1 | SHK20450.1 | SAMN02745248_01541 | SAMN02745248_02026 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.627 |
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