STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK01210.1Transposase DDE domain-containing protein. (452 aa)    
Predicted Functional Partners:
SHJ66705.1
Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.
  
  
 0.814
SHJ87475.1
Hypothetical protein.
  
  
 0.756
SHJ57614.1
Putative ATP-dependent Lon protease.
  
  
 0.648
SHJ57651.1
Putative ATP-dependent Lon protease.
  
  
 0.648
SHJ57688.1
Putative ATP-dependent Lon protease.
  
  
 0.648
SHK29655.1
Transposase DDE domain group 1.
  
     0.504
SHK01237.1
Catalase; Belongs to the catalase family.
       0.500
SHK01184.1
Hypothetical protein.
       0.456
SHJ86883.1
Type I restriction-modification system, DNA methylase subunit.
   
    0.402
SHJ97045.1
Type I restriction enzyme M protein.
   
    0.402
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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