Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ57614.1 | SHJ57651.1 | SAMN02745248_00449 | SAMN02745248_00450 | Putative ATP-dependent Lon protease. | Putative ATP-dependent Lon protease. | 0.961 |
SHJ57614.1 | SHJ57688.1 | SAMN02745248_00449 | SAMN02745248_00451 | Putative ATP-dependent Lon protease. | Putative ATP-dependent Lon protease. | 0.961 |
SHJ57614.1 | SHJ66705.1 | SAMN02745248_00449 | SAMN02745248_00639 | Putative ATP-dependent Lon protease. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.745 |
SHJ57614.1 | SHJ87475.1 | SAMN02745248_00449 | SAMN02745248_01191 | Putative ATP-dependent Lon protease. | Hypothetical protein. | 0.674 |
SHJ57614.1 | SHK01210.1 | SAMN02745248_00449 | SAMN02745248_01573 | Putative ATP-dependent Lon protease. | Transposase DDE domain-containing protein. | 0.648 |
SHJ57651.1 | SHJ57614.1 | SAMN02745248_00450 | SAMN02745248_00449 | Putative ATP-dependent Lon protease. | Putative ATP-dependent Lon protease. | 0.961 |
SHJ57651.1 | SHJ57688.1 | SAMN02745248_00450 | SAMN02745248_00451 | Putative ATP-dependent Lon protease. | Putative ATP-dependent Lon protease. | 0.983 |
SHJ57651.1 | SHJ66705.1 | SAMN02745248_00450 | SAMN02745248_00639 | Putative ATP-dependent Lon protease. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.745 |
SHJ57651.1 | SHJ87475.1 | SAMN02745248_00450 | SAMN02745248_01191 | Putative ATP-dependent Lon protease. | Hypothetical protein. | 0.674 |
SHJ57651.1 | SHK01210.1 | SAMN02745248_00450 | SAMN02745248_01573 | Putative ATP-dependent Lon protease. | Transposase DDE domain-containing protein. | 0.648 |
SHJ57688.1 | SHJ57614.1 | SAMN02745248_00451 | SAMN02745248_00449 | Putative ATP-dependent Lon protease. | Putative ATP-dependent Lon protease. | 0.961 |
SHJ57688.1 | SHJ57651.1 | SAMN02745248_00451 | SAMN02745248_00450 | Putative ATP-dependent Lon protease. | Putative ATP-dependent Lon protease. | 0.983 |
SHJ57688.1 | SHJ66705.1 | SAMN02745248_00451 | SAMN02745248_00639 | Putative ATP-dependent Lon protease. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.745 |
SHJ57688.1 | SHJ87475.1 | SAMN02745248_00451 | SAMN02745248_01191 | Putative ATP-dependent Lon protease. | Hypothetical protein. | 0.674 |
SHJ57688.1 | SHK01210.1 | SAMN02745248_00451 | SAMN02745248_01573 | Putative ATP-dependent Lon protease. | Transposase DDE domain-containing protein. | 0.648 |
SHJ66705.1 | SHJ57614.1 | SAMN02745248_00639 | SAMN02745248_00449 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Putative ATP-dependent Lon protease. | 0.745 |
SHJ66705.1 | SHJ57651.1 | SAMN02745248_00639 | SAMN02745248_00450 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Putative ATP-dependent Lon protease. | 0.745 |
SHJ66705.1 | SHJ57688.1 | SAMN02745248_00639 | SAMN02745248_00451 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Putative ATP-dependent Lon protease. | 0.745 |
SHJ66705.1 | SHJ86883.1 | SAMN02745248_00639 | SAMN02745248_01168 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Type I restriction-modification system, DNA methylase subunit. | 0.483 |
SHJ66705.1 | SHJ87475.1 | SAMN02745248_00639 | SAMN02745248_01191 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Hypothetical protein. | 0.835 |
page 1 of 3