Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ56893.1 | SHK05472.1 | SAMN02745248_00426 | SAMN02745248_01675 | Nitroreductase. | Multimeric flavodoxin WrbA. | 0.409 |
SHK01160.1 | SHK05472.1 | SAMN02745248_01571 | SAMN02745248_01675 | Hypothetical protein. | Multimeric flavodoxin WrbA. | 0.512 |
SHK01237.1 | SHK05472.1 | SAMN02745248_01574 | SAMN02745248_01675 | Catalase; Belongs to the catalase family. | Multimeric flavodoxin WrbA. | 0.415 |
SHK05444.1 | SHK05472.1 | SAMN02745248_01674 | SAMN02745248_01675 | Methyltransferase domain-containing protein. | Multimeric flavodoxin WrbA. | 0.723 |
SHK05444.1 | SHK05493.1 | SAMN02745248_01674 | SAMN02745248_01676 | Methyltransferase domain-containing protein. | Isopentenyl-diphosphate delta-isomerase. | 0.515 |
SHK05444.1 | SHK05520.1 | SAMN02745248_01674 | SAMN02745248_01677 | Methyltransferase domain-containing protein. | Putative efflux protein, MATE family. | 0.524 |
SHK05472.1 | SHJ56893.1 | SAMN02745248_01675 | SAMN02745248_00426 | Multimeric flavodoxin WrbA. | Nitroreductase. | 0.409 |
SHK05472.1 | SHK01160.1 | SAMN02745248_01675 | SAMN02745248_01571 | Multimeric flavodoxin WrbA. | Hypothetical protein. | 0.512 |
SHK05472.1 | SHK01237.1 | SAMN02745248_01675 | SAMN02745248_01574 | Multimeric flavodoxin WrbA. | Catalase; Belongs to the catalase family. | 0.415 |
SHK05472.1 | SHK05444.1 | SAMN02745248_01675 | SAMN02745248_01674 | Multimeric flavodoxin WrbA. | Methyltransferase domain-containing protein. | 0.723 |
SHK05472.1 | SHK05493.1 | SAMN02745248_01675 | SAMN02745248_01676 | Multimeric flavodoxin WrbA. | Isopentenyl-diphosphate delta-isomerase. | 0.519 |
SHK05472.1 | SHK05520.1 | SAMN02745248_01675 | SAMN02745248_01677 | Multimeric flavodoxin WrbA. | Putative efflux protein, MATE family. | 0.519 |
SHK05472.1 | SHK30277.1 | SAMN02745248_01675 | SAMN02745248_02260 | Multimeric flavodoxin WrbA. | Flavodoxin. | 0.534 |
SHK05493.1 | SHK05444.1 | SAMN02745248_01676 | SAMN02745248_01674 | Isopentenyl-diphosphate delta-isomerase. | Methyltransferase domain-containing protein. | 0.515 |
SHK05493.1 | SHK05472.1 | SAMN02745248_01676 | SAMN02745248_01675 | Isopentenyl-diphosphate delta-isomerase. | Multimeric flavodoxin WrbA. | 0.519 |
SHK05493.1 | SHK05520.1 | SAMN02745248_01676 | SAMN02745248_01677 | Isopentenyl-diphosphate delta-isomerase. | Putative efflux protein, MATE family. | 0.773 |
SHK05520.1 | SHK05444.1 | SAMN02745248_01677 | SAMN02745248_01674 | Putative efflux protein, MATE family. | Methyltransferase domain-containing protein. | 0.524 |
SHK05520.1 | SHK05472.1 | SAMN02745248_01677 | SAMN02745248_01675 | Putative efflux protein, MATE family. | Multimeric flavodoxin WrbA. | 0.519 |
SHK05520.1 | SHK05493.1 | SAMN02745248_01677 | SAMN02745248_01676 | Putative efflux protein, MATE family. | Isopentenyl-diphosphate delta-isomerase. | 0.773 |
SHK30277.1 | SHK05472.1 | SAMN02745248_02260 | SAMN02745248_01675 | Flavodoxin. | Multimeric flavodoxin WrbA. | 0.534 |