Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK10624.1 | SHK10663.1 | SAMN02745248_01776 | SAMN02745248_01777 | Hypothetical protein. | Virus attachment protein p12 family protein. | 0.586 |
SHK10624.1 | SHK10695.1 | SAMN02745248_01776 | SAMN02745248_01778 | Hypothetical protein. | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.569 |
SHK10624.1 | SHK10727.1 | SAMN02745248_01776 | SAMN02745248_01779 | Hypothetical protein. | Ferrous iron transport protein A. | 0.481 |
SHK10624.1 | SHK10754.1 | SAMN02745248_01776 | SAMN02745248_01780 | Hypothetical protein. | Ferrous iron transport protein A. | 0.493 |
SHK10624.1 | SHK31859.1 | SAMN02745248_01776 | SAMN02745248_02295 | Hypothetical protein. | Protein of unknown function. | 0.610 |
SHK10663.1 | SHK10624.1 | SAMN02745248_01777 | SAMN02745248_01776 | Virus attachment protein p12 family protein. | Hypothetical protein. | 0.586 |
SHK10663.1 | SHK10695.1 | SAMN02745248_01777 | SAMN02745248_01778 | Virus attachment protein p12 family protein. | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.746 |
SHK10663.1 | SHK10727.1 | SAMN02745248_01777 | SAMN02745248_01779 | Virus attachment protein p12 family protein. | Ferrous iron transport protein A. | 0.618 |
SHK10663.1 | SHK10754.1 | SAMN02745248_01777 | SAMN02745248_01780 | Virus attachment protein p12 family protein. | Ferrous iron transport protein A. | 0.644 |
SHK10695.1 | SHK10624.1 | SAMN02745248_01778 | SAMN02745248_01776 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Hypothetical protein. | 0.569 |
SHK10695.1 | SHK10663.1 | SAMN02745248_01778 | SAMN02745248_01777 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Virus attachment protein p12 family protein. | 0.746 |
SHK10695.1 | SHK10727.1 | SAMN02745248_01778 | SAMN02745248_01779 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Ferrous iron transport protein A. | 0.974 |
SHK10695.1 | SHK10754.1 | SAMN02745248_01778 | SAMN02745248_01780 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Ferrous iron transport protein A. | 0.924 |
SHK10727.1 | SHK10624.1 | SAMN02745248_01779 | SAMN02745248_01776 | Ferrous iron transport protein A. | Hypothetical protein. | 0.481 |
SHK10727.1 | SHK10663.1 | SAMN02745248_01779 | SAMN02745248_01777 | Ferrous iron transport protein A. | Virus attachment protein p12 family protein. | 0.618 |
SHK10727.1 | SHK10695.1 | SAMN02745248_01779 | SAMN02745248_01778 | Ferrous iron transport protein A. | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.974 |
SHK10727.1 | SHK10754.1 | SAMN02745248_01779 | SAMN02745248_01780 | Ferrous iron transport protein A. | Ferrous iron transport protein A. | 0.875 |
SHK10727.1 | SHK10783.1 | SAMN02745248_01779 | SAMN02745248_01781 | Ferrous iron transport protein A. | Amino acid ABC transporter ATP-binding protein, PAAT family. | 0.401 |
SHK10727.1 | SHK52997.1 | SAMN02745248_01779 | SAMN02745248_02751 | Ferrous iron transport protein A. | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.905 |
SHK10754.1 | SHK10624.1 | SAMN02745248_01780 | SAMN02745248_01776 | Ferrous iron transport protein A. | Hypothetical protein. | 0.493 |
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