STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK14193.1UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (336 aa)    
Predicted Functional Partners:
SHK11413.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
  
 0.961
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.947
SHK11165.1
UDP-galactopyranose mutase.
    
 0.864
SHJ49516.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.805
SHK23397.1
UDP-glucose pyrophosphorylase.
   
 0.779
SHK14230.1
Membrane protein involved in the export of O-antigen and teichoic acid.
     
 0.761
SHK14507.1
UDP-glucose 4-epimerase.
 
 0.680
SHK14263.1
Glycosyltransferase involved in cell wall bisynthesis.
 
   
 0.616
SHK11196.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
    
 0.565
SHJ49483.1
dTDP-glucose 4,6-dehydratase.
 
 
0.545
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.