STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK25169.1NitT/TauT family transport system substrate-binding protein. (344 aa)    
Predicted Functional Partners:
SHK25133.1
NitT/TauT family transport system permease protein.
 
 
 0.987
SHK25104.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.955
SHK25052.1
NADH-quinone oxidoreductase subunit G.
 
     0.697
SHK11529.1
NitT/TauT family transport system ATP-binding protein.
  
 
 0.689
SHK11675.1
NitT/TauT family transport system ATP-binding protein.
  
 
 0.689
SHK25084.1
NADPH-dependent glutamate synthase beta chain.
 
     0.684
SHK11554.1
NitT/TauT family transport system permease protein.
  
 
 0.668
SHK11700.1
NitT/TauT family transport system permease protein.
  
 
 0.668
SHK46377.1
NitT/TauT family transport system ATP-binding protein.
  
 
 0.666
SHK46323.1
NitT/TauT family transport system permease protein.
  
 
 0.659
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.