STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK31465.1ABC-2 type transport system ATP-binding protein. (231 aa)    
Predicted Functional Partners:
SHK31429.1
ABC-2 family transporter protein.
 
   0.899
SHK31491.1
ABC-2 family transporter protein.
  
   0.853
SHK08280.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.744
SHJ86052.1
ABC-type multidrug transport system, ATPase and permease component.
  
 
  0.696
ecfA
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.669
SHK22682.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.666
SHK08427.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.612
SHK07253.1
ABC-2 family transporter protein.
 
   0.572
SHJ77707.1
ABC-2 type transport system ATP-binding protein.
  
     0.552
SHK18376.1
Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
  
 
0.530
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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