Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ85457.1 | SHK39042.1 | SAMN02745248_01101 | SAMN02745248_02437 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA replication protein DnaC. | 0.850 |
SHJ87143.1 | SHK39042.1 | SAMN02745248_01178 | SAMN02745248_02437 | Putative DNA primase/helicase. | DNA replication protein DnaC. | 0.804 |
SHK39042.1 | SHJ85457.1 | SAMN02745248_02437 | SAMN02745248_01101 | DNA replication protein DnaC. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.850 |
SHK39042.1 | SHJ87143.1 | SAMN02745248_02437 | SAMN02745248_01178 | DNA replication protein DnaC. | Putative DNA primase/helicase. | 0.804 |
SHK39042.1 | SHK39073.1 | SAMN02745248_02437 | SAMN02745248_02438 | DNA replication protein DnaC. | DnaD and phage-associated domain-containing protein. | 0.814 |
SHK39042.1 | SHK39111.1 | SAMN02745248_02437 | SAMN02745248_02439 | DNA replication protein DnaC. | Hypothetical protein. | 0.773 |
SHK39042.1 | SHK39136.1 | SAMN02745248_02437 | SAMN02745248_02440 | DNA replication protein DnaC. | PDDEXK-like protein of unknown function. | 0.780 |
SHK39042.1 | SHK39180.1 | SAMN02745248_02437 | SAMN02745248_02441 | DNA replication protein DnaC. | Recombination protein RecT. | 0.800 |
SHK39042.1 | SHK39219.1 | SAMN02745248_02437 | SAMN02745248_02442 | DNA replication protein DnaC. | AAA domain-containing protein. | 0.778 |
SHK39042.1 | SHK39249.1 | SAMN02745248_02437 | SAMN02745248_02443 | DNA replication protein DnaC. | Hypothetical protein. | 0.709 |
SHK39042.1 | SHK39282.1 | SAMN02745248_02437 | SAMN02745248_02444 | DNA replication protein DnaC. | Hypothetical protein. | 0.709 |
SHK39042.1 | SHK39386.1 | SAMN02745248_02437 | SAMN02745248_02447 | DNA replication protein DnaC. | ORF6N domain-containing protein. | 0.702 |
SHK39073.1 | SHK39042.1 | SAMN02745248_02438 | SAMN02745248_02437 | DnaD and phage-associated domain-containing protein. | DNA replication protein DnaC. | 0.814 |
SHK39073.1 | SHK39111.1 | SAMN02745248_02438 | SAMN02745248_02439 | DnaD and phage-associated domain-containing protein. | Hypothetical protein. | 0.773 |
SHK39073.1 | SHK39136.1 | SAMN02745248_02438 | SAMN02745248_02440 | DnaD and phage-associated domain-containing protein. | PDDEXK-like protein of unknown function. | 0.785 |
SHK39073.1 | SHK39180.1 | SAMN02745248_02438 | SAMN02745248_02441 | DnaD and phage-associated domain-containing protein. | Recombination protein RecT. | 0.849 |
SHK39073.1 | SHK39219.1 | SAMN02745248_02438 | SAMN02745248_02442 | DnaD and phage-associated domain-containing protein. | AAA domain-containing protein. | 0.773 |
SHK39073.1 | SHK39249.1 | SAMN02745248_02438 | SAMN02745248_02443 | DnaD and phage-associated domain-containing protein. | Hypothetical protein. | 0.709 |
SHK39073.1 | SHK39282.1 | SAMN02745248_02438 | SAMN02745248_02444 | DnaD and phage-associated domain-containing protein. | Hypothetical protein. | 0.709 |
SHK39073.1 | SHK39386.1 | SAMN02745248_02438 | SAMN02745248_02447 | DnaD and phage-associated domain-containing protein. | ORF6N domain-containing protein. | 0.708 |
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