Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK20801.1 | SHK48904.1 | SAMN02745248_02037 | SAMN02745248_02652 | Nitric oxide dioxygenase. | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.987 |
SHK20801.1 | SHK48973.1 | SAMN02745248_02037 | SAMN02745248_02654 | Nitric oxide dioxygenase. | [FeFe] hydrogenase, group A. | 0.412 |
SHK48904.1 | SHK20801.1 | SAMN02745248_02652 | SAMN02745248_02037 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Nitric oxide dioxygenase. | 0.987 |
SHK48904.1 | SHK48936.1 | SAMN02745248_02652 | SAMN02745248_02653 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Hypothetical protein. | 0.628 |
SHK48904.1 | SHK48973.1 | SAMN02745248_02652 | SAMN02745248_02654 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | [FeFe] hydrogenase, group A. | 0.407 |
SHK48936.1 | SHK48904.1 | SAMN02745248_02653 | SAMN02745248_02652 | Hypothetical protein. | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.628 |
SHK48936.1 | SHK48973.1 | SAMN02745248_02653 | SAMN02745248_02654 | Hypothetical protein. | [FeFe] hydrogenase, group A. | 0.507 |
SHK48973.1 | SHK20801.1 | SAMN02745248_02654 | SAMN02745248_02037 | [FeFe] hydrogenase, group A. | Nitric oxide dioxygenase. | 0.412 |
SHK48973.1 | SHK48904.1 | SAMN02745248_02654 | SAMN02745248_02652 | [FeFe] hydrogenase, group A. | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.407 |
SHK48973.1 | SHK48936.1 | SAMN02745248_02654 | SAMN02745248_02653 | [FeFe] hydrogenase, group A. | Hypothetical protein. | 0.507 |