STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK49592.1Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family. (104 aa)    
Predicted Functional Partners:
SHJ73379.1
Methyltransferase, MtaA/CmuA family; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.973
SHJ80984.1
methylmalonyl-CoA mutase C-terminal domain-containing protein/methyltransferase cognate corrinoid proteins.
 
 
 0.924
SHJ80875.1
Methyltransferase, MtaA/CmuA family; Belongs to the uroporphyrinogen decarboxylase family.
 
  
  0.906
SHJ80928.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
    0.782
SHK36240.1
uroporphyrinogen-III synthase.
  
 
 0.781
SHJ55375.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.775
SHJ80956.1
[methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.775
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 0.680
SHJ80902.1
GTPase, G3E family.
 
    0.590
SHK03997.1
Oxygen-independent coproporphyrinogen-3 oxidase.
     
 0.572
Your Current Organism:
Hathewaya proteolytica
NCBI taxonomy Id: 1121331
Other names: Clostridium proteolyticum DSM 3090, H. proteolytica DSM 3090, Hathewaya proteolytica DSM 3090
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