STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383295_02440Unannotated protein. (143 aa)    
Predicted Functional Partners:
GCA_000383295_02441
Unannotated protein.
 
     0.961
GCA_000383295_02439
Unannotated protein.
 
   
 0.949
GCA_000383295_02444
Unannotated protein.
 
     0.893
GCA_000383295_02448
Unannotated protein.
 
     0.890
GCA_000383295_02443
Unannotated protein.
 
     0.888
GCA_000383295_02442
Unannotated protein.
 
     0.864
GCA_000383295_02446
Unannotated protein.
 
     0.862
GCA_000383295_02447
Unannotated protein.
 
     0.856
GCA_000383295_02437
Unannotated protein.
       0.754
GCA_000383295_02436
Unannotated protein.
       0.751
Your Current Organism:
Clostridium sporosphaeroides
NCBI taxonomy Id: 1121334
Other names: Clostridium sporosphaeroides VPI 4527, [. sporosphaeroides DSM 1294, [Clostridium] sporosphaeroides DSM 1294
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.