STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tglProtein-glutamine gamma-glutamyltransferase Tgl. (257 aa)    
Predicted Functional Partners:
AGC67636.1
Spore germination protein.
  
     0.723
sleB1
Cell wall hydrolase SleB.
  
   
 0.671
AGC67381.1
Hypothetical protein.
       0.625
ytxC
Sporulation protein YtxC.
       0.625
AGC67922.1
Hypothetical protein.
  
     0.547
gerAC
Germination protein, Ger(X)C family.
  
     0.525
AGC68495.1
gamma-D-glutamyl-L-diamino acid endopeptidase 1.
  
     0.493
AGC68398.1
Hypothetical protein.
  
     0.477
AGC67379.1
ABC transporter-like protein.
       0.464
AGC67198.1
Hypothetical protein.
  
    0.430
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.