STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC67441.1XkdN-like protein. (133 aa)    
Predicted Functional Partners:
AGC67443.1
Peptidoglycan-binding lysin domain-containing protein.
 
    0.918
AGC67439.1
XkdM protein, phage-like element PBSX.
 
    0.917
AGC67446.1
Phage-like element PBSX protein, XkdS.
 
    0.917
AGC67447.1
PBSX prophage-like protein.
 
    0.912
AGC67438.1
Phage tail sheath protein.
 
    0.911
AGC67444.1
Phage protein.
 
     0.897
AGC67448.1
Hypothetical protein.
 
    0.886
AGC67442.1
Phage tape measure protein.
 
     0.881
AGC67432.1
Minor structural GP20 protein.
 
     0.849
AGC67428.1
Portal protein.
 
    0.848
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.