STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC67460.1Transposase. (146 aa)    
Predicted Functional Partners:
AGC67461.1
Transposase family protein.
     0.904
AGC67475.1
Transposase family protein.
 
     0.787
AGC68759.1
Transposase family protein.
 
     0.787
AGC68794.1
Transposase family protein.
 
     0.787
AGC69134.1
Radical SAM domain protein.
  
     0.677
pcm
protein-L-isoaspartate O-methyltransferase Pcm.
 
     0.549
AGC67669.1
Class II aldolase/adducin family protein.
  
     0.510
AGC67866.1
PHP domain-containing protein.
  
     0.482
AGC68789.1
Transposase, mutator type; Required for the transposition of the insertion element.
  
     0.435
AGC67667.1
Hypothetical protein.
  
     0.425
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.