STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC67475.1Transposase family protein. (424 aa)    
Predicted Functional Partners:
AGC67474.1
Transposase.
     0.904
AGC67460.1
Transposase.
 
     0.787
lplB3
Protein LplB.
       0.455
AGC69134.1
Radical SAM domain protein.
  
     0.441
AGC67473.1
Two-component response regulator, CheY-like domain protein.
  
    0.410
AGC69281.1
Peptidase family S51.
  
     0.408
yesM1
Putative two-component sensor kinase YesM.
       0.400
ytcP2
ABC transporter permease protein YtcP.
       0.400
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.