Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGC67353.1 | AGC67529.1 | Cst_c03290 | Cst_c05070 | Negative regulator of genetic competence. | Alpha-2-macroglobulin domain protein. | 0.416 |
AGC67529.1 | AGC67353.1 | Cst_c05070 | Cst_c03290 | Alpha-2-macroglobulin domain protein. | Negative regulator of genetic competence. | 0.416 |
AGC67529.1 | AGC67530.1 | Cst_c05070 | Cst_c05080 | Alpha-2-macroglobulin domain protein. | Hypothetical protein. | 0.746 |
AGC67529.1 | AGC69079.1 | Cst_c05070 | Cst_c21070 | Alpha-2-macroglobulin domain protein. | Transcriptional regulator, XRE family. | 0.454 |
AGC67529.1 | AGC69312.1 | Cst_c05070 | Cst_c23520 | Alpha-2-macroglobulin domain protein. | ATP-dependent nuclease subunit B-like protein. | 0.410 |
AGC67529.1 | nrdR | Cst_c05070 | Cst_c15520 | Alpha-2-macroglobulin domain protein. | Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.522 |
AGC67529.1 | serC | Cst_c05070 | Cst_c05090 | Alpha-2-macroglobulin domain protein. | Phosphoserine aminotransferase SerC; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.450 |
AGC67530.1 | AGC67529.1 | Cst_c05080 | Cst_c05070 | Hypothetical protein. | Alpha-2-macroglobulin domain protein. | 0.746 |
AGC67530.1 | serC | Cst_c05080 | Cst_c05090 | Hypothetical protein. | Phosphoserine aminotransferase SerC; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.464 |
AGC69079.1 | AGC67529.1 | Cst_c21070 | Cst_c05070 | Transcriptional regulator, XRE family. | Alpha-2-macroglobulin domain protein. | 0.454 |
AGC69312.1 | AGC67529.1 | Cst_c23520 | Cst_c05070 | ATP-dependent nuclease subunit B-like protein. | Alpha-2-macroglobulin domain protein. | 0.410 |
nrdR | AGC67529.1 | Cst_c15520 | Cst_c05070 | Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | Alpha-2-macroglobulin domain protein. | 0.522 |
serC | AGC67529.1 | Cst_c05090 | Cst_c05070 | Phosphoserine aminotransferase SerC; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | Alpha-2-macroglobulin domain protein. | 0.450 |
serC | AGC67530.1 | Cst_c05090 | Cst_c05080 | Phosphoserine aminotransferase SerC; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | Hypothetical protein. | 0.464 |