STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC67594.1Flagellar FlbD family protein. (92 aa)    
Predicted Functional Partners:
fliM1
Flagellar M-ring protein FliF.
 
  
 0.950
fliM2
Flagellar motor switch protein FliM.
 
  
 0.939
fliY1
Flagellar motor switch phosphatase FliY.
 
  
 0.933
fliG
Flagellar motor switch protein FliG.
 
  
 0.883
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
    0.876
flgE
Flagellar hook protein FlgE.
 
     0.831
fliH
Flagellar assembly protein FliH.
 
  
 0.803
fliI
Flagellum-specific ATP synthase FliI.
 
  
 0.765
AGC67599.1
Flagellar biogenesis protein.
  
  
 0.740
AGC67731.1
Hypothetical protein.
 
   
 0.734
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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