STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC67671.1Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. (380 aa)    
Predicted Functional Partners:
AGC67672.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 0.888
AGC69606.1
Integral membrane sensor signal transduction histidine kinase.
 
 0.876
AGC67516.1
Signal transduction histidine kinase, LytS.
 
 
 0.868
AGC68679.1
Multi-sensor signal transduction histidine kinase.
 
 0.836
AGC69199.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 0.824
AGC67093.1
Integral membrane sensor signal transduction histidine kinase.
 
 
  0.823
lytS
Sensor protein LytS.
 
 
 0.819
AGC69310.1
Two component system histidine kinase.
 
 0.819
yesM2
Sensor histidine kinase YesM.
 
 0.815
AGC67243.1
Integral membrane sensor signal transduction histidine kinase.
 
 0.813
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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