STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iorAIndolepyruvate oxidoreductase subunit IorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (582 aa)    
Predicted Functional Partners:
iorB
Indolepyruvate oxidoreductase subunit IorB.
 
 0.992
nifJ2
Pyruvate-flavodoxin oxidoreductase NifJ.
  
 
 0.888
nifJ1
Pyruvate-flavodoxin oxidoreductase NifJ.
  
 
 0.884
paaK
Phenylacetate-coenzyme A ligase PaaK; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
    0.844
AGC67076.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 
 0.776
AGC68549.1
Amino acid-binding ACT domain protein.
 
    0.725
NfnA
NADPH-dependent glutamate synthase.
 
  
 0.639
FhbC
Fe only hydrogenase 1.
     
 0.468
nuoF2
NADH-quinone oxidoreductase subunit F 2.
     
 0.463
korC
2-oxoglutarate synthase subunit KorC.
  
 
 0.451
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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