STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC68111.1Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family. (520 aa)    
Predicted Functional Partners:
AGC68110.1
alpha-N-arabinofuranosidase 2; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.936
arfB
alpha-L-arabinofuranosidase ArfB.
 
  
 0.739
xynD
Arabinoxylan arabinofuranohydrolase XynD.
  
   
 0.659
AGC68671.1
Hypothetical protein.
 
     0.655
AGC67241.1
Extracellular S-layer domain-containing protein.
 
    
 0.623
AGC68045.1
Putative rhamnogalacturonan acetylesterase.
 
  
 0.615
AGC68119.1
ABC transporter, solute-binding protein.
 
    0.516
xynA
Endo-1,4-beta-xylanase A; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.492
pemA
Pectinesterase A.
 
     0.463
xylA1
Xylosidase/arabinosidase XylA; Belongs to the glycosyl hydrolase 43 family.
 
     0.453
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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