STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC68205.1Oxidoreductase domain protein. (342 aa)    
Predicted Functional Partners:
AGC67074.1
Oxidoreductase domain protein.
 
     0.779
AGC68583.1
Oxidoreductase domain-containing protein.
  
     0.744
AGC68031.1
Xylose isomerase domain-containing protein TIM barrel.
 
  
 0.729
AGC68584.1
Xylose isomerase domain-containing protein TIM barrel.
 
  
 0.680
kdgK
2-keto-3-deoxygluconate kinase KdgK.
 
  
 0.658
alkH
NAD-dependent aldehyde dehydrogenase AlkH; Belongs to the aldehyde dehydrogenase family.
   
  
 0.651
Gck1
PfkB domain protein.
  
  
 0.608
lysS
lysine--tRNA ligase LysS; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.602
galK
Galactokinase GalK; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.584
AGC67348.1
Xylose isomerase domain-containing protein TIM barrel.
 
  
 0.580
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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