STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC68354.1Hypothetical protein. (271 aa)    
Predicted Functional Partners:
AGC68352.1
Hypothetical protein.
       0.819
CpaF1
AAA ATPase.
       0.819
AGC68355.1
Hypothetical protein.
       0.799
AGC68356.1
Hypothetical protein.
     
 0.776
sps11
Serine/threonine-protein kinase Sps1.
       0.726
AGC68351.1
Hypothetical protein.
       0.724
AGC68349.1
Hypothetical protein.
       0.671
AGC68348.1
Hypothetical protein.
       0.664
spo0J
Stage 0 sporulation protein J; Belongs to the ParB family.
  
 
 0.646
AGC69714.1
parB-like partition protein; Belongs to the ParB family.
  
 
 0.646
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.