STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acoAAcetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha. (321 aa)    
Predicted Functional Partners:
acoB2
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta.
 0.999
acoC
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system.
 0.998
lpdA
Dihydrolipoyl dehydrogenase LpdA.
 
 0.992
acoB1
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta.
 
0.984
gcvH
Glycine cleavage system H protein GcvH; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
     
 0.786
AGC68558.1
NAD-dependent epimerase/dehydratase.
     
 0.723
AGC68561.1
TPR repeat-containing protein.
       0.723
nifJ1
Pyruvate-flavodoxin oxidoreductase NifJ.
  
 
 0.656
xanB
Xanthan biosynthesis protein XanB.
     
 0.655
nifJ2
Pyruvate-flavodoxin oxidoreductase NifJ.
     
 0.631
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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