STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipO7Lipoprotein LipO. (518 aa)    
Predicted Functional Partners:
AGC68611.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
    0.923
AGC68610.1
Binding-protein-dependent transport systems inner membrane component.
 
   0.901
AGC67147.1
ABC-type sugar transport system, permease component.
  
   0.834
lplC10
Protein LplC.
  
   0.831
lplC7
Protein LplC.
  
   0.828
lplC2
Protein LplC.
  
   0.802
lplC1
Protein LplC.
  
   0.792
lplC3
Protein LplC.
  
   0.783
lplB2
Protein LplB.
  
    0.778
yteP3
Putative multiple-sugar transport system permease YteP.
  
    0.778
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.