STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC68632.1Extracellular solute-binding protein, family 1. (440 aa)    
Predicted Functional Partners:
AGC68631.1
Putative carbohydrate uptake ABC transporter permease protein.
   0.933
araQ
L-arabinose transport system permease protein AraQ.
 
   0.920
agaR3
Alpha-galactosidase 1.
 
    0.671
AGC68681.1
Binding-protein-dependent transport system inner membrane component.
   0.635
yesP2
ABC transporter permease protein YesP.
   0.604
AGC69307.1
Sugar ABC transporter permease protein.
   0.603
AGC69196.1
Binding-protein-dependent transport systems inner membrane component.
   0.595
yesP1
ABC transporter permease protein YesP.
   0.592
AGC67246.1
ABC transporter membrane spanning protein; Sugar.
  
   0.587
AGC67245.1
ABC transporter inner membrane protein.
   0.571
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.