STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC68844.1Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family. (435 aa)    
Predicted Functional Partners:
tcyL1
L-cystine transport system permease protein TcyL.
 
 0.979
tcyL2
L-cystine transport system permease protein TcyL.
 
 0.978
tcyN
L-cystine import ATP-binding protein TcyN.
 
 0.961
AGC68412.1
Amine oxidase.
  
  
 0.915
AGC67901.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S).
     
 0.792
AGC68004.1
FAD dependent oxidoreductase.
  
 
 0.778
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.738
adhE
Aldehyde-alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.702
guaB
Inosine-5'-monophosphate dehydrogenase GuaB.
  
 
 0.684
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.679
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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