STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC69068.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
nuoF2
NADH-quinone oxidoreductase subunit F 2.
   
 
 0.903
AGC69392.1
Hypothetical protein.
    
   0.812
nuoE
NADH-quinone oxidoreductase subunit E.
   
   0.712
FhmC
Hypothetical protein.
   
   0.712
FhmD
Hypothetical protein.
   
   0.712
AGC68651.1
Hypothetical protein.
 
 
 0.692
acpP
Acyl carrier protein AcpP; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.639
nifJ1
Pyruvate-flavodoxin oxidoreductase NifJ.
  
   0.632
AGC68239.1
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit; Chain I.
   
   0.618
AGC68915.1
Thylakoid-like protein.
   
   0.618
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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