STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC69131.1Major facilitator superfamily MFS_1. (440 aa)    
Predicted Functional Partners:
AGC69132.1
Hypothetical protein.
       0.594
AGC67517.1
Two component transcriptional regulator, AraC family.
  
     0.517
lipO4
Lipoprotein LipO.
  
     0.485
AGC67515.1
Glucoside hyrolase family10.
 
     0.461
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.449
lplD
Putative glucosidase LplD.
 
  
 0.447
AGC68721.1
Transporter, major facilitator family.
  
  
 0.421
AGC67072.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.