STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC69199.1Integral membrane sensor signal transduction histidine kinase. (612 aa)    
Predicted Functional Partners:
AGC69198.1
Two component transcriptional regulator, AraC family.
 
 
 0.977
AGC67190.1
Two component transcriptional regulator, AraC family.
 
 0.907
AGC67094.1
Two component transcriptional regulator, AraC family.
 
 0.873
AGC68613.1
Transcriptional regulator.
 
 0.873
AGC68678.1
Two component transcriptional regulator, AraC family.
 
 0.872
AGC67473.1
Two-component response regulator, CheY-like domain protein.
 
 
 0.843
AGC69309.1
Two component transcriptional regulator, AraC family.
 
 0.835
AGC67671.1
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
 
 0.824
AGC69605.1
Two component transcriptional regulator, AraC family.
 
 0.814
AGC67845.1
Two component transcriptional regulator, AraC family.
 
 0.813
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.