STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC69276.1Putative NADH dehydrogenase/NAD(P)H nitroreductase. (167 aa)    
Predicted Functional Partners:
birA
Bifunctional protein biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.816
AGC69275.1
Hypothetical protein.
       0.773
AGC69274.1
HhH-GPD family protein.
       0.682
AGC67640.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
 0.627
tycA
Tyrocidine synthase 1.
   
 
 0.577
lcfB
long-chain-fatty-acid--CoA ligase LcfB.
   
 
 0.577
AGC68528.1
Hypothetical protein.
   
 
 0.544
AGC69398.1
Thioredoxin-disulfide reductase.
  
 
 0.542
AGC68595.1
Hypothetical protein.
  
  
 0.520
nox
NADH oxidase Nox.
     
 0.454
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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